Quadratic definition time in xarray.DataArray.to_zarr(compute=False)#12299
Merged
crusaderky merged 2 commits intodask:mainfrom Feb 19, 2026
Merged
Quadratic definition time in xarray.DataArray.to_zarr(compute=False)#12299crusaderky merged 2 commits intodask:mainfrom
crusaderky merged 2 commits intodask:mainfrom
Conversation
Contributor
Unit Test ResultsSee test report for an extended history of previous test failures. This is useful for diagnosing flaky tests. 21 files ±0 21 suites ±0 5h 4m 6s ⏱️ - 3m 58s Results for commit 949cead. ± Comparison against base commit 6ac1553. |
Collaborator
|
Thank you! We've seen many reports of it and have recommend people just use chunksize=-1, most of the time no one actually computes the returned Delayed anyway, it is simply used for writing a schema. |
dcherian
approved these changes
Feb 19, 2026
This file contains hidden or bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
Sign up for free
to join this conversation on GitHub.
Already have an account?
Sign in to comment
Add this suggestion to a batch that can be applied as a single commit.This suggestion is invalid because no changes were made to the code.Suggestions cannot be applied while the pull request is closed.Suggestions cannot be applied while viewing a subset of changes.Only one suggestion per line can be applied in a batch.Add this suggestion to a batch that can be applied as a single commit.Applying suggestions on deleted lines is not supported.You must change the existing code in this line in order to create a valid suggestion.Outdated suggestions cannot be applied.This suggestion has been applied or marked resolved.Suggestions cannot be applied from pending reviews.Suggestions cannot be applied on multi-line comments.Suggestions cannot be applied while the pull request is queued to merge.Suggestion cannot be applied right now. Please check back later.
Closes #12298
Reduce the time it takes for
xarray.DataArray.to_zarr(..., compute=False)to return a delayed object from O(n^2) to O(n), where n is the total number of tasks in the graph.In my production environment, this reduces the time it takes to store the metadata of an array backed by a ~70k tasks graph from 3 minutes to 2 seconds.
Read #12298 for full explanation and analysis.
No unit test since, AFAIK, there are no microbenchmarks available?