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Commits on Feb 10, 2026

• Merge pull request #248 from CompOmics/version-bump

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  RalfG

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• Fix psm_utils pin in installer dependencies

  RalfG

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• Drop support for Python 3.10 (required for DeepLC)

  RalfG

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Commits on Feb 9, 2026

• Add optional cbor to installer deps

  RalfG

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• Version bump; update installer dependency pins; update lock file

  RalfG

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• Merge pull request #247 from CompOmics/rodvrees-patch-1

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Commits on Jan 27, 2026

• Update citation references tims2rescore in __main__.py

  rodvrees

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Commits on Dec 22, 2025

• Merge pull request #243 from CompOmics/fix/report-gui-fixes

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  RalfG

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Commits on Dec 18, 2025

• report: Catch indexerror if no confidently identified PSMs (fixes #231)

  RalfG

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• Merge pull request #242 from CompOmics/fix/report-gui-fixes

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  RalfG

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• Only run windows installer test on main (condition was removed in #241)

  RalfG

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Commits on Dec 15, 2025

• Fix unused import

  RalfG

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  d82d8a2

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• Merge branch 'main' of https://github.com/compomics/ms2rescore into fix/report-gui-fixes

  RalfG

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• Fix issues with missing imports in Windows installer

  RalfG

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• Also write log when running through GUI

  RalfG

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• In GUI, always write both stdout and stderr to devnull if None, fixing DeepLC issues in GUI in debug mode.

  RalfG

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• Fix broken report due to mismatched plotly.js version; get plotly.js version dynamically

  RalfG

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• Merge pull request #241 from CompOmics/update-im2deep-version

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  RalfG

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• Propagate working uv install for windows-installer to publish workflow; re-enable jobs that were disabled for testing

  RalfG

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• Another actions test

  RalfG

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• Handle exceptions during package collection and log warnings for failures

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• Another actions test

  RalfG

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• Try with `uv sync`

  RalfG

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• Test pinned dependencies for pyinstaller through dependency group

  RalfG

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Commits on Dec 11, 2025

• update im2deep version, fix docstring

  rodvrees

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Commits on Oct 22, 2025

• Merge pull request #240 from CompOmics/fix/docs-build

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  RalfG

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• Version bump

  RalfG

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• Update readthedocs config to use dependency groups

  RalfG

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Commits on Oct 20, 2025

• Merge pull request #239 from CompOmics/feature/add-regex-validation

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  RalfG

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• Update tests

  RalfG

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• Implement suggested changes

  RalfG

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• Implement requested fixes

  RalfG

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• Implement suggested fixes

  RalfG

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• Add validation and exception raising for PSM and spectrum ID regex patterns

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  RalfG

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Commits on Oct 17, 2025

• Merge pull request #238 from CompOmics/feature/update-lockfile

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  RalfG

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