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Dynamic versioning with setuptools_scm

Status: Open.

#137 In cgat-developers/cgat-apps;

· ns-rse opened on Nov 29, 2024

cgat-0.7.4 pip install : FileNotFoundError: [Errno 2] No such file or directory: 'requires.txt'

bugSomething isn't workingSomething isn't working

Status: Open.

#134 In cgat-developers/cgat-apps;

· ns-rse opened on Oct 31, 2024

Wrong columns in --sanitize="ucsc" --assembly-report=FILE?

Status: Open.

#115 In cgat-developers/cgat-apps;

· IanSudbery opened on Feb 4, 2022

change cimports

Status: Open.

#111 In cgat-developers/cgat-apps;

· Acribbs opened on Oct 27, 2021

[bed2fasta]: Use of --use-strand and --output-mode=segments together gives incorrect result.

bugSomething isn't workingSomething isn't working

Status: Open.

#83 In cgat-developers/cgat-apps;

· IanSudbery opened on Apr 28, 2021

PeakShapeResult has no attribute hist

Status: Open.

#75 In cgat-developers/cgat-apps;

· IanSudbery opened on Oct 22, 2020

Problem while trying to filter gtf file by longest transcript

Status: Open.

#71 In cgat-developers/cgat-apps;

· eduardopdev opened on Jul 7, 2020

Understanding min_kmer_matches in fastqtools.filter_by_sequence

Status: Open.

#54 In cgat-developers/cgat-apps;

· paulbrodersen opened on Nov 21, 2019

bam2bam and log redirection

Status: Open.

#30 In cgat-developers/cgat-apps;

· IanSudbery opened on Oct 23, 2018

bam_vs_bed error if bashrc outputs anything

Status: Open.

#29 In cgat-developers/cgat-apps;

· IanSudbery opened on Oct 23, 2018