Can't run on ZSH #3
Description
I'm able to npm install this module, and I recently switched to oh-my-zsh as my shell instead of bash, and I can't seem to use it, despite putting the $HOME/node_modules into my path. The full log is below.
➜ projects npm install bionode-sra
-
> bionode-sra@1.0.1 preinstall /Users/olga/node_modules/bionode-sra
> cd sra; make
mkdir -p build
curl http://ftp-trace.ncbi.nlm.nih.gov/sra/sdk/2.3.5-2/sratoolkit.2.3.5-2-mac64.tar.gz -o build/sratoolkit.2.3.5-2-mac64.tar.gz
% Total % Received % Xferd Average Speed Time Time Time Current
Dload Upload Total Spent Left Speed
100 26.1M 100 26.1M 0 0 977k 0 0:00:27 0:00:27 --:--:-- 769k
cd build; tar xzvf sratoolkit.2.3.5-2-mac64.tar.gz
...
x sratoolkit.2.3.5-2-mac64/schema/vdb/vdb.vschema
mv build/sratoolkit.2.3.5-2-mac64/bin bin
bionode-sra@1.0.1 ../node_modules/bionode-sra
├── minimist@1.1.0
├── JSONStream@0.8.4 (through@2.3.6, jsonparse@0.0.5)
└── through2@0.5.1 (xtend@3.0.0, readable-stream@1.0.33)
➜ projects export PATH=$PATH:$HOME/node_modules
➜ projects bionode-sra fastq-dump SRP041736
zsh: permission denied: bionode-sra
➜ projects chmod ugo+x ~/node_modules/*
➜ projects bionode-sra fastq-dump SRP041736
zsh: permission denied: bionode-sra
➜ projects ll ~/node_modules
total 0
drwxr-xr-x 14 olga staff 476B Nov 27 12:16 bionode
drwxr-xr-x 14 olga staff 476B Nov 27 12:27 bionode-sra