Methods used in EMP analyses. Includes sample processing for extraction and sequencing, and computational methods for basic data processing and more advanced analyses.

Accompanying information to methods:

• protocols Wet lab methods.
• code Notebooks and scripts for reproducing analyses.
• data Results of sequence processing and analyses.

• methods_release1.md Information for reproducing analyses and figures in Thompson et al. (2017).

• methods_release2.md Primary data processing for the EMP500 project.