Skip to content

Update medpy recipe for graphcut support#21523

Merged
BiocondaBot merged 2 commits intobioconda:masterfrom
PertuyF:medpy
Apr 16, 2020
Merged

Update medpy recipe for graphcut support#21523
BiocondaBot merged 2 commits intobioconda:masterfrom
PertuyF:medpy

Conversation

@PertuyF
Copy link
Copy Markdown
Contributor

@PertuyF PertuyF commented Apr 15, 2020

Describe your pull request here

Update recipe for medpy to support graphcut extension (maxflow/mincut).
Following changes were applied:

  1. Recipe is no longer noarch as it compiles a cpp extension
  2. Depends on boost library
  3. Sources are patched to link boost_python library as installed by conda
  4. Cython library is renamed (using symlink) after build to fix cython fancy suffix

Please read the guidelines for Bioconda recipes before opening a pull request (PR).

  • If this PR adds or updates a recipe, use "Add" or "Update" appropriately as the first word in its title.
  • New recipes not directly relevant to the biological sciences need to be submitted to the conda-forge channel instead of Bioconda.
  • PRs require reviews prior to being merged. Once your PR is passing tests and ready to be merged, please issue the @BiocondaBot please add label command.
  • Please post questions on Gitter or ping @bioconda/core in a comment.
Please use the following BiocondaBot commands:

Everyone has access to the following BiocondaBot commands, which can be given in a comment:

@BiocondaBot please update Merge the master branch into a PR.
@BiocondaBot please add label Add the please review & merge label.
@BiocondaBot please fetch artifacts Post links to CI-built packages/containers.
You can use this to test packages locally.

For members of the Bioconda project, the following command is also available:

@BiocondaBot please merge Upload built packages/containers and merge a PR.
Someone must approve a PR first!
This reduces CI build time by reusing built artifacts.

Also, the bot watches for comments from non-members that include @bioconda/<team> and will automatically re-post them to notify the addressed <team>.

@PertuyF
Copy link
Copy Markdown
Contributor Author

PertuyF commented Apr 15, 2020

@BiocondaBot please add label

@BiocondaBot BiocondaBot added the please review & merge set to ask for merge label Apr 15, 2020
Comment thread recipes/medpy/meta.yaml
@dpryan79
Copy link
Copy Markdown
Contributor

@bioconda-bot please merge

@BiocondaBot
Copy link
Copy Markdown
Collaborator

I will attempt to upload artifacts and merge this PR. This may take some time, please have patience.

@BiocondaBot BiocondaBot merged commit d9ca4d7 into bioconda:master Apr 16, 2020
@PertuyF
Copy link
Copy Markdown
Contributor Author

PertuyF commented Apr 17, 2020

Thanks @dpryan79 @bgruening !

@PertuyF PertuyF deleted the medpy branch April 17, 2020 09:13
Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment

Labels

please review & merge set to ask for merge

Projects

None yet

Development

Successfully merging this pull request may close these issues.

4 participants