-
Notifications
You must be signed in to change notification settings - Fork 194
SCHEMA: Issues to implement #1402
Copy link
Copy link
Closed
Labels
schemaIssues related to the YAML schema representation of the specification. Patch version release.Issues related to the YAML schema representation of the specification. Patch version release.
Description
The following BIDS Validator issues should be implementable without further changes to the schema:
- TOO_FEW_AUTHORS (
length(json.Authors) > 1, select dataset_description.json) - SLICETIMING_VALUES_GREATOR_THAN_REPETITION_TIME
- EFFECTIVEECHOSPACING_TOO_LARGE
- ECHOTIME1_2_DIFFERENCE_UNREASONABLE (phasediff only; implementing for phase1/phase2 would be a bonus)
- SLICETIMING_ELEMENTS
- REPETITIONTIME_PREPARATION_NOT_CONSISTENT
- VOLUME_TIMING_AND_REPETITION_TIME_MUTUALLY_EXCLUSIVE (needs issue annotation, possibly reimplement in checks)
- NIFTI_DIMENSION
- NIFTI_UNIT
- NIFTI_PIXDIM
- BOLD_NOT_4D
- SFORM_AND_QFORM_IN_IMAGE_HEADER_ARE_ZERO
-
NIFTI_PIXDIM4Implementation detail of old Nifti parser; covered by BOLD_NOT_4D and REPETITION_TIME_MISMATCH - MAGNITUDE_FILE_WITH_TOO_MANY_DIMENSIONS
- T1W_FILE_WITH_TOO_MANY_DIMENSIONS
- REPETITION_TIME_GREATER_THAN
- ECHO_TIME_GREATER_THAN
- ECHO_TIME_DIFFERENCE_GREATER_THAN
- TOTAL_READOUT_TIME_GREATER_THAN
- REPETITION_TIME_MISMATCH
- EFFECTIVEECHOSPACING_LARGER_THAN_TOTALREADOUTTIME
- POST_LABELING_DELAY_GREATER
- BOLUS_CUT_OFF_DELAY_TIME_GREATER
- LABELING_DURATION_GREATER
- ECHO_TIME_ELEMENTS
- "Participants age 89 or higher" (yes, this really is the code; change it to something consistent)
- MISSING_TSV_COLUMN_IEEG_CHANNELS - Update
rules.tabular_data.ieeg.iEEGChannels.initial_columns - MISSING_TSV_COLUMN_IEEG_ELECTRODES - Update
rules.tabular_data.ieeg.iEEGElectroes.initial_columns - STIMULUS_FILE_MISSING -
checks: [exists(columns.stim_file, "stimuli") == length(columns.stim_file)]
The following issues can be implemented at present by using the selector path == '/dataset_description.json' to ensure that they're only run once (a different approach may be justified later):
- SAMPLES_TSV_MISSING
- SUBJECT_FOLDERS
- PARTICIPANT_ID_MISMATCH
- PHENOTYPE_SUBJECTS_MISSING
Reactions are currently unavailable
Metadata
Metadata
Assignees
Labels
schemaIssues related to the YAML schema representation of the specification. Patch version release.Issues related to the YAML schema representation of the specification. Patch version release.