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src/02-common-principles.md

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@@ -161,19 +161,20 @@ A summary of all entities in BIDS and the order in which they MUST be
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specified is available in the [entity table](./99-appendices/04-entity-table.md)
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in the appendix.
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### Parametrically linked file collections
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### Entity-linked file collections
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A set of files that are related to each other based on a repetitive acquisition of
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sequential data by changing acquisition parameters one (or multiple) at a time.
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The suffix serves as an identifier for these collections, holding a logical grouping
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of constituent files.
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sequential data by changing acquisition parameters one (or multiple) at a time and/or by
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being inherent components of the same data. The suffix serves as an identifier for these
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collections, holding a logical grouping of constituent files.
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Within each collection, files MUST be distinguished from each other by at least one
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entity (e.g., `echo`) that corresponds to an altered acquisition parameter (e.g.,
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`EchoTime`). Note that these entities MUST be described by the specification and the
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parameter changes they declare SHOULD NOT invalidate the definition of the accompanying
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suffix. For example, the use of the `echo` entity along with the `T1w` suffix casts doubt on
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the validity of the identified contrast weighting.
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Provided the conditions above are satisfied, any suffix (e.g. `bold`) can identify a parametrically linked file collection, although certain suffixes are exclusive for this purpose (e.g., `MP2RAGE`).
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`EchoTime`) or that defines a component relationship (e.g., `part`). Note that these entities
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MUST be described by the specification and the parameter changes they declare SHOULD NOT invalidate
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the definition of the accompanying suffix. For example, the use of the `echo` entity along with the
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`T1w` suffix casts doubt on the validity of the identified contrast weighting.
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Provided the conditions above are satisfied, any suffix (e.g. `bold`) can identify an entity-linked file
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collection, although certain suffixes are exclusive for this purpose (e.g., `MP2RAGE`).
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All the use cases concerning this convention are RECOMMENDED to be included in the [file collections](./99-appendices/10-file-collections.md) appendix for clarity. This convention is mainly intended for but not
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limited to MRI modalities.
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src/99-appendices/10-file-collections.md

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# Appendix X: File collections
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To give context to the use of [parametrically linked file collections](./02-common-principles.md#file-name-structure), applications appealing to this common
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principle are listed by descriptive tables under their respective modalities.
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To give context to the use of [entity-linked file collections](./02-common-principles.md#file-name-structure), applications concerned with this
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common principle are listed by descriptive tables under their respective modalities.
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## Magnetic Resonance Imaging
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