Skip to content

TST: Test failures with pandas 1.3.0 #11918

@pllim

Description

@pllim

pandas 1.3.0 was released 3 hours ago (as of writing this): https://github.com/pandas-dev/pandas/releases/tag/v1.3.0

It is causing the following test failures. I think we can just update the test results, but I want to make sure that subpackage maintainers are fine with this plan. Doctest is trickier but we can just require pandas>=1.3 for those?

________________ [doctest] astropy.table.table.Table.to_pandas _________________
3572 
3573           >>> q = [1, 2] * u.m
3574           >>> tm = Time([1998, 2002], format='jyear')
3575           >>> sc = SkyCoord([5, 6], [7, 8], unit='deg')
3576           >>> dt = TimeDelta([3, 200] * u.s)
3577 
3578           >>> t = QTable([q, tm, sc, dt], names=['q', 'tm', 'sc', 'dt'])
3579 
3580           >>> df = t.to_pandas(index='tm')
3581           >>> with pd.option_context('display.max_columns', 20):
Differences (unified diff with -expected +actual):
    @@ -1,4 +1,3 @@
                   q  sc.ra  sc.dec              dt
    -tm
     1998-01-01  1.0    5.0     7.0 0 days 00:00:03
     2002-01-01  2.0    6.0     8.0 0 days 00:03:20

/Users/runner/work/astropy/astropy/.tox/py37-test-alldeps/lib/python3.7/site-packages/astropy/table/table.py:3581: DocTestFailure
______________________ TestPandas.test_from_pandas_index _______________________

self = <astropy.table.tests.test_table.TestPandas object at 0x1346a5390>

    def test_from_pandas_index(self):
        tm = Time([1998, 2002], format='jyear')
        x = [1, 2]
        t = table.Table([tm, x], names=['tm', 'x'])
        tp = t.to_pandas(index='tm')
    
        t2 = table.Table.from_pandas(tp)
        assert t2.colnames == ['x']
    
        t2 = table.Table.from_pandas(tp, index=True)
>       assert t2.colnames == ['tm', 'x']
E       AssertionError: assert ['index', 'x'] == ['tm', 'x']
E         At index 0 diff: 'index' != 'tm'
E         Use -v to get the full diff

../../.tox/py37-test-alldeps/lib/python3.7/site-packages/astropy/table/tests/test_table.py:1961: AssertionError
_____________________________ [doctest] pandas.rst _____________________________
059     2015-07-06T00:00:00.000000000     3
060 
061 Converting to :class:`~pandas.DataFrame` can also be done with
062 :meth:`~astropy.timeseries.TimeSeries.to_pandas`:
063 
064 .. doctest-requires:: pandas
065 
066     >>> ts['b'] = [1.2, 3.4, 5.4]
067     >>> df_new = ts.to_pandas()
068     >>> df_new
Differences (unified diff with -expected +actual):
    @@ -1,4 +1,3 @@
                 a    b
    -time
     2015-07-04  1  1.2
     2015-07-05  2  3.4

/Users/runner/work/astropy/astropy/docs/timeseries/pandas.rst:68: DocTestFailure

Example log with pandas 1.3.0 (failed): https://github.com/astropy/astropy/runs/2973199416?check_suite_focus=true

Example log with pandas 1.2.5 (passed): https://github.com/astropy/astropy/runs/2968371046?check_suite_focus=true

Metadata

Metadata

Assignees

No one assigned

    Type

    No type

    Projects

    No projects

    Milestone

    No milestone

    Relationships

    None yet

    Development

    No branches or pull requests

    Issue actions