This code implements the model proposed in the paper "Multi-view graph neural network with cascaded attention for lncRNA-miRNA interaction prediction " (accepted by Knowledge-Based Systems).
Please make sure that all the following packages are successfully installed:
- pytorch==1.10.2
- torch_geometric==2.0.3
- pandas==1.3.5
- numpy== 1.22.2
- scikit-learn==1.0.2
To get the environment resolved quickly, run:
cd code/
pip install -r requirements.txt
Please download code and data, then execute the following command:
cd code/
python main.py
If it helps you, please kindly cite this paper:
@article{li2023multi,
title={Multi-view graph neural network with cascaded attention for lncRNA-miRNA interaction prediction},
author={Li, Hui and Wu, Bin and Sun, Miaomiao and Ye, Yangdong and Zhu, Zhenfeng and Chen, Kuisheng},
journal={Knowledge-Based Systems},
volume={268},
pages={110492},
year={2023},
publisher={Elsevier}
}