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The commit addresses issue #1028 in a better way.
Although, BEMIO was reading the AQWA data correctly, the writeBEMIOH5 did not do the necessary transpose.
BEMIO was reading the AQWA data correctly, but the writeBEMIOH5.m function was not doing the necessary transpose.
For reference, here is a check that readAQWA function was working correctly.
However, when I looked at the h5 file in an h5 file viewer, the writeBEMIOH5 function should have taken a transpose.
Following the fix I made, here is how the hydrostatics matrix looks, confirming that the writeBEMIOH5 and readBEMIOH5 are working as intended.
and here is the h5 file viewer,