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Fixes #144; swap position x z coordinate interpretation#145

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UnHumbleBen merged 3 commits intodevfrom
dev-issue-144
Nov 9, 2020
Merged

Fixes #144; swap position x z coordinate interpretation#145
UnHumbleBen merged 3 commits intodevfrom
dev-issue-144

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@UnHumbleBen
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@UnHumbleBen UnHumbleBen commented Nov 1, 2020

Do not merge until UC-Davis-molecular-computing/scadnano#488 is closed

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I'm a bit confused. This looks like very little changed. Just one file, and essentially only comments in that file changed.

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UnHumbleBen commented Nov 1, 2020 via email

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Oops, didn't notice which repo it is.

Swapped x and z values of helix groups and helix positions,
with the exception of 1_staple_1_helix_origami_position_nondefault.sc
where the exact position didn't matter
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@dave-doty I changed the scripts associated with the output_designs directory. Are there any scripts associated with the proposal directory? Or should I change those manually (i.e. load them into my local hosted scadnano so that they automatically get converted into version 0.13.0, and then Save that new file).

Another thing that comes to mind is does the cadnano import need to be rewritten? I imagine it doesn't because cadnano doesn't have gridless option, but just want to make sure.

Once I add the changes to proposal examples, and copy the examples directory into the scadnano web app repo, should be ready to merge 😄

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Are there any scripts associated with the proposal directory?

No, proposal isn't used in the dropdown menu of examples.

Another thing that comes to mind is does the cadnano import need to be rewritten?

Try importing a cadnano design and see if it works.

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UnHumbleBen commented Nov 9, 2020

I am actually confused about the purpose of the examples/ directory in web/ of the scadnano web app. Besides the files that are listed in the dropdown menu, what is the purpose of the other files that are not on the dropdown menu? They cannot be viewed normally from using the app.

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I am actually confused about the purpose of the examples/ directory in web/ of the scadnano web app. Besides the files that are listed in the dropdown menu, what is the purpose of the other files that are not on the dropdown menu? They cannot be viewed normally from using the app.

Pure laziness. This way I can run a script that copies all examples from the Python repo to here, without thinking about which ones are used in the dropdown menu.

@UnHumbleBen UnHumbleBen merged commit beb3549 into dev Nov 9, 2020
@dave-doty dave-doty deleted the dev-issue-144 branch August 9, 2023 17:10
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