-
Notifications
You must be signed in to change notification settings - Fork 3
next release v2.6.0 #28
New issue
Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.
By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.
Already on GitHub? Sign in to your account
Conversation
|
from me it is all good |
|
Pushed lots of fixes, but left some errors (see https://github.com/NiftyPET/NIMPA/actions/runs/5193633461/jobs/9364422220) because I'm unsure about them |
6d52f61 to
700f7cf
Compare
Codecov Report
@@ Coverage Diff @@
## master #28 +/- ##
==========================================
+ Coverage 7.84% 10.98% +3.13%
==========================================
Files 9 16 +7
Lines 2102 3131 +1029
==========================================
+ Hits 165 344 +179
- Misses 1937 2787 +850
|
| ''' | ||
| # possible DICOM file extensions | ||
| ext = ('dcm', 'DCM', 'ima', 'IMA') | ||
| ext = 'dcm', 'ima' |
There was a problem hiding this comment.
Choose a reason for hiding this comment
The reason will be displayed to describe this comment to others. Learn more.
btw can this use dcmext ('dcm', 'ima', 'img') instead?
| for f in chain(outdir.glob('*.nii*'), outdir.glob('*.json')): | ||
| # remove previous files | ||
| os.remove(f) | ||
| run([dcm2niix.bin, '-i', 'y', '-v', 'n', '-o', outdir, '-f', '%f_%s', str(indat)]) |
There was a problem hiding this comment.
Choose a reason for hiding this comment
The reason will be displayed to describe this comment to others. Learn more.
this was 'f', '%f_%s' instead of '-f', '%f_%s'. Presumably latter is correct.
|
/tag v2.6.0 f80a3d6 |
acrmoduleimg.signamoduleprc&imgupdatespkg_resources=>importlib_resourcessetup.cfg=>pyproject.toml