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JananiV3010/README.md

Hello! I am Janani!

Pursuing MSE Biomedical Engineering at Johns Hopkins University
Building AI systems at the intersection of deep learning, medical imaging, and clinical domain knowledge.


About Me

I am a BME graduate student with a background that spans biomedical engineering, clinical psychology, and 5+ years in scientific data systems. My work focuses on making AI practical and interpretable in healthcare from automated synapse detection pipelines to deep learning-based vector surveillance for global health.

  • Previously: Scientific Application Analyst (ELN systems, pre-clinical research)
  • Currently: MS BME @ JHU | Computational Medicine, AI in Medicine, Biomedical Data Science, AI Project & Product Management
  • Looking for: Medical Imaging AI · ML Engineering · Data Science & Data Analysis · Healthcare Consulting · AI Project & Product Management roles
  • Baltimore, MD → Open to Relocation

Tech Stack

ML & Deep Learning PyTorch TensorFlow scikit-learn ResNet ViT EfficientNet MobileNet-V3 Mask R-CNN

Computer Vision & Imaging OpenCV scikit-image 3D Segmentation Image Classification ECG/EEG Signal Processing

MLOps & Infrastructure Docker Hydra Git Google Colab Kaggle

Data & Domain Python IBM SPSS IDBS ELN Microfluidics Clinical Workflow Optimization


Featured Projects

Project What it does Key Result
Digital Entomologist Automated taxonomic classification of malaria-vector mosquitoes via deep learning 99.65% Hamming accuracy · 30× faster training
Synpipe Containerized synapse detection pipeline — Python migration + Docker/Hydra orchestration 2.43s per volume · reproducible one-click workflow
ResNet vs ViT Benchmarking CNNs vs Vision Transformers on CIFAR-10 for medical imaging insights ViT + transfer learning: 98.75% vs ResNet: 90.48%
NeRF & Gaussian Splatting 3D scene reconstruction pipeline — COLMAP, nerfstudio, headless GPU environments Deep MLOps debugging across Windows/Linux/Colab
Hospital-Resident Matching Gale-Shapley stable matching algorithm for NRMP residency allocation O(n²) guaranteed stability · hackathon project

Currently

  • Coursework: Advanced Data Science for BME · Deep Learning for Medical Imaging · Fundamentals of Product Management
  • Building: Synpipe: containerized ML pipeline for synaptic segmentation

Let's Connect

LinkedIn Email


"The goal is not to build models. The goal is to build things that matter."

Pinned Loading

  1. Digital-Entomologist Digital-Entomologist Public

    Jupyter Notebook

  2. Hospital-Resident-Matching Hospital-Resident-Matching Public

    Implementation of Stable Matching Algorithm for Hospital-Resident Matching

    Jupyter Notebook

  3. NerF-Gaussian-Splatting NerF-Gaussian-Splatting Public

    Jupyter Notebook

  4. ResNet-ViT-Analysis ResNet-ViT-Analysis Public

    Jupyter Notebook

  5. Synpipe Synpipe Public

    Python