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feat: Onboard gnomAD dataset#264

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adlersantos merged 5 commits into
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gnomad
Jan 27, 2022
Merged

feat: Onboard gnomAD dataset#264
adlersantos merged 5 commits into
mainfrom
gnomad

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@happyhuman

@happyhuman happyhuman commented Jan 7, 2022

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Description

Dataset name: gnomad
Pipeline name: gnomad.copy_gcs_bucket

Checklist

  • Please merge this PR for me once it is approved.
  • If this PR adds or edits a dataset or pipeline, it was reviewed and approved by the Google Cloud Public Datasets team beforehand.
  • If this PR adds or edits a dataset or pipeline, I put all my code inside datasets/<YOUR-DATASET> and nothing outside of that directory.
  • This PR is appropriately labeled.

@adlersantos adlersantos self-requested a review January 10, 2022 17:36
@adlersantos adlersantos added the data onboarding Onboard a dataset or submit a pipeline label Jan 10, 2022
@adlersantos adlersantos changed the title Gnomad feat: Onboard gnomAD dataset Jan 10, 2022

@adlersantos adlersantos left a comment

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Just one change plus the linter errors and we should be good to go!

project_id: bigquery-public-data
source_bucket: "gnomad-public-requester-pays"
destination_bucket: "gcp-public-data--gnomad"
google_impersonation_chain: "{{ var.json.gnomad.service_account }}"

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Let's add an additional parameter under args so we keep all files historically:

transfer_options:
  deleteObjectsUniqueInSink: False

@adlersantos adlersantos merged commit 804b440 into main Jan 27, 2022
@adlersantos adlersantos deleted the gnomad branch January 27, 2022 22:43
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2 participants