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@HenkMutsaerts HenkMutsaerts commented Apr 29, 2023

Linked issue

Closes #1387

How to test

Before testing starts - we need to complete all tasks Jan added to the issue.

Can you run BASIL & FABBER and see if:
for multi-PLD BASIL (@MDijsselhof):

  • it doesn't crash
  • output images still look good
  • processing is faster

for multi-TE FABBER (@BeatrizPadrela):

  • it doesn't crash
  • output images still look good
  • processing is faster

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@HenkMutsaerts HenkMutsaerts linked an issue Apr 29, 2023 that may be closed by this pull request
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@jan-petr jan-petr left a comment

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I fixed one minor mistake. Make sure that the mask includes also lesions etc. Note that we shouldn't null any PWI values. Instead, a proper mask has to be passed to BASIL. So Mathijs+Bea will need to complete this issue.

Lets continue working on this once Mathijs is done with Look-Locker quantification and once we merge everything. So that we can rebase the commits made so far.

@jan-petr jan-petr self-assigned this May 17, 2023
@jan-petr jan-petr self-requested a review July 6, 2023 08:43
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OK

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@MDijsselhof MDijsselhof left a comment

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Code looks good, processing works and is very quick

@jan-petr jan-petr force-pushed the feature-#1387_MaskingBASIL branch from 574d2d2 to 18905c6 Compare July 6, 2023 20:39
@jan-petr jan-petr merged commit 18905c6 into develop Jul 6, 2023
@jan-petr jan-petr deleted the feature-#1387_MaskingBASIL branch July 6, 2023 20:40
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Simple masking in BASIL

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