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Fix multiPLD quantification #978

@jan-petr

Description

@jan-petr

Description

Fix several errors in multi-PLD quantification to make it work with general multi-PLD and Hadamard as well.

Requirements

  • ASL module line 310 crashes for uneven number of volumes - we need to skip in case we have deltams
  • Make sure that multiple repetitions are treated correctly for multiPLD. ResampleASL line 265 - make averaging based on PLD vector and don't assume any specific PLD order.
  • Clean the code to make the multi-PLD uniquely for BASIL and remove the unused non-BASIL code.
  • Clear separation between multi-PLD and single-PLD calls of BASIL.
  • Make sure the correct PLDs are used for BASIL.
  • Correct all BASIL input and model parameters.
  • Configure BASIL for Look-Locker, multi-PLD, and Hadamard.
  • Output ATT maps from BASIL.
  • Full processing of ATT maps.

How to test

Optional: insert description about how to test the code changes here

Release notes

BASIL for multi-PLD, Look-Locker, and Hadamard. Correct BASIL configuration. Output ATT maps.

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