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Description
Description
While processing ADNI case 003_S_6264 using develop, I got this error:
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Running xASL_module_ASL ...
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=== Subject: sub-003S6264_1, Session: ASL_1, Module: xASL_module_ASL_<SESSION>, 24-Sep-2021 10:53:25 ===
Cleaning data to rerun subject sub-003S6264_1
nRemoving lock folders:100%
Restoring backupped _ORI (original) files:
Deleting native space CAT12 temporary folders:
Deleting native space files for module 2:100%
Deleting all standard space files for module 2
Cleaning up x-struct:100%
Cleaning up QC_Collection json:100%
3D_GRASE sequence detected
No TopUp scans available, skipping...
Automatic alignment with center of mass: skipping, was too close
x.modules.asl.SpikeRemovalThreshold was not defined yet, default setting = 0.01 used
SPM motion estimation
ERROR: ASL module terminated for subject 1: sub-003S6264_1
ans =
'Reference to non-existent field 'HadamardType'.
Error in xASL_wrp_RealignASL (line 125)
if nFrames>2 && bSubtraction && (numel(unique(x.Q.Initial_PLD))>1
|| numel(unique(x.EchoTime))>1 || x.modules.asl.HadamardType~=0) %multiPLD or multiTE or Hadamard
Error in xASL_module_ASL (line 306)
xASL_wrp_RealignASL(x);
I've been rerunning it using main, to check if the last release is fine. There the bug does not occur.
Requirements
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How to test
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Release notes
Improve resample and realign methods by adding parameter & field checks.
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