[adamraikes@gpu56 Allo_test]$ export DATASETROOT=$PWD
[adamraikes@gpu56 Allo_test]$ export IMPORTMODULES=1
[adamraikes@gpu56 Allo_test]$ export PROCESSMODULES=0
[adamraikes@gpu56 Allo_test]$ singularity run -B $PWD:/data/incoming -B $PWD:/data/outgoing $XASL
=============================== Open ExploreASL v1.10.1 Docker ================================
mkdir: cannot create directory '/opt/incoming/': Read-only file system
cp: cannot create directory '/opt/incoming': Read-only file system
Run ExploreASL...
Root directory: /opt/incoming/
------------------------------------------
Setting up environment variables
---
LD_LIBRARY_PATH is .:/opt/mcr/v97//runtime/glnxa64:/opt/mcr/v97//bin/glnxa64:/opt/mcr/v97//sys/os/glnxa64:/opt/mcr/v97//sys/opengl/lib/glnxa64
Unable to obtain exclusive lock on CTF directory because of a file access error. If you are running multiple simultaneous instances of this application, initialization errors may occur.  (To disable this message set the environment variable MCR_INHIBIT_CTF_LOCK.  Additional diagnostic information may be available by setting the environment variables DSERVICES_FSLOCK_VERBOSE and DSERVICES_FSLOCK_WARNING.)
Failed to create a directory required to extract the CTF file.
 Please make sure that you have appropriate permissions and re-run the
 application.
Error initializing CTF Archive: 
Some error has occurred in the file: core/mclCtfFileExtractor.cpp, at line: 62.
 The error message is: 
Failed to create a directory required to extract the CTF file.
 Please make sure that you have appropriate permissions and re-run the
 application.

MCL:ComponentDirectoryExtraction
Error: Error initializing CTF Archive: 
Some error has occurred in the file: core/mclCtfFileExtractor.cpp, at line: 62.
 The error message is: 
Failed to create a directory required to extract the CTF file.
 Please make sure that you have appropriate permissions and re-run the
 application.

cp: cannot stat '/opt/incoming/.': No such file or directory
=========================================== DONE =============================================