Description

This is a Linux bug:

Operating System: CentOS Linux 7 (Core)
CPE OS Name: cpe:/o:centos:centos:7
Kernel: Linux 3.10.0-1160.11.1.el7.x86_64
Architecture: x86-64

On an UCL Linux server I got the following errors:

for: Command not found.
i: Undefined variable.
for: Command not found.
i: Undefined variable.

Within xASL_adm_GzipAllFiles for:

for i in find * | grep -E \.nii$; do gzip -1 -f -q -v "$i"; done'

These errors seem the consequence of using an old Linux distribution:
centOS 7 with Linux Kernel 3.10.0x (2013-2014). Apparently, this looping wasn't possible back then?

Tasks

• Address the looping for the old Linux version?
• Allow catching errors for the Linux-zipping and use the slower Matlab-zipping as backup
• Check also issue xASL_adm_GzipAllFiles.m improve linux behaviour #1052 - is that the same problem?

How to test

Try running xASL_adm_GzipAllFiles

Release notes