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Description
Description
Allow dual compartment quantification option for FEAST. Currently, when dual compartment quantification is requested, this is only applied to the crushed & non-crushed CBF images separately, and FEAST only uses the single-compartment model when calculating the ATT times. We might just want to give a warning when a dual compartment quantification was used but FEAST works with single compartment quantification.
Perhaps a bit too much for now to use FEAST with the dual compartment model, which the original FEAST paper also doesn't do.
Likewise, we probably want a warning when CBF was quantified with BASIL (even though this now outputs a separate CBF NIfTI); as it may not do this in the future.
Tasks
- Print in
xASL_quant_FEASTthat we assume the white paper single compartment quantification model for obtaining the FEAST ATT -
xASL_quant_FEAST: Add warning ifx.Q.bUseBasilQuantification==0 -
xASL_quant_FEAST: Add warning ifx.Q.nCompartments~=1 -
xASL_wrp_Quantify: Add warning if 'x.Q.nCompartments` wasn't 1 or 2
How to test
Run single PreDiva dataset
Release notes
Improve FEAST quantification warnings