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Achievement: YOLOAchievement: Arctic Code Vault ContributorAchievement: Pull Sharkx2

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  1. pinellolab/CRISPR-millipede-target pinellolab/CRISPR-millipede-target Public

    Calculate the enrichment scores of CRISPR alleles and variants from direct target amplicon-sequencing data using Bayesian linear regression model "millipede".

    Jupyter Notebook 2

  2. pinellolab/CRISPR-Correct pinellolab/CRISPR-Correct Public

    Perform CRISPR guide mapping and analysis that considers protospace self-editing and surrogate sensor sequences. Self-editing aware mapping takes a hamming-distance approach unbiased by expectation…

    Python 4

  3. CRISPR-library-prep CRISPR-library-prep Public

    Some helper functions for planning library prep for CRISPR screens

    Jupyter Notebook

  4. pinellolab/CRISPR-millipede-pipelines pinellolab/CRISPR-millipede-pipelines Public

    Repository contains the pipeline scripts and resources for running tools in the CRISPR-millipede suite at scale.

    WDL