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BUG: slices exceeded bounds if mask extends close to the edge of the image#1911

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cookpa merged 1 commit intomasterfrom
tile_mask_extent
Oct 1, 2025
Merged

BUG: slices exceeded bounds if mask extends close to the edge of the image#1911
cookpa merged 1 commit intomasterfrom
tile_mask_extent

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@cookpa
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@cookpa cookpa commented Oct 1, 2025

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@gdevenyi
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gdevenyi commented Oct 1, 2025

Ahh. I was going crazy trying to tame slice generation and I ended up doing it manually outside of the code. I bet this was it...

https://github.com/CoBrALab/MAGeTBrain-nextflow/blob/master/bin/make_qc_image.sh#L29-L44

@cookpa cookpa merged commit f4b694b into master Oct 1, 2025
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@cookpa cookpa deleted the tile_mask_extent branch October 1, 2025 17:23
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2 participants