Skip to main content

Advertisement

Springer Nature Link
Log in
Menu
Find a journal Publish with us Track your research
Search
Saved research
Cart
  1. Home
  2. Medical Image Computing and Computer-Assisted Intervention – MICCAI’99
  3. Conference paper

3D Image Matching Using a Finite Element Based Elastic Deformation Model

  • Conference paper
  • pp 202–209
  • Cite this conference paper
Medical Image Computing and Computer-Assisted Intervention – MICCAI’99 (MICCAI 1999)
3D Image Matching Using a Finite Element Based Elastic Deformation Model
  • Matthieu Ferrant6,7,
  • Simon K. Warfield6,
  • Charles R. G. Guttmann6,
  • Robert V. Mulkern6,8,
  • Ferenc A. Jolesz6 &
  • …
  • Ron Kikinis6 

Part of the book series: Lecture Notes in Computer Science ((LNCS,volume 1679))

Included in the following conference series:

  • International Conference on Medical Image Computing and Computer-Assisted Intervention
  • 3592 Accesses

  • 92 Citations

Abstract

We present a new approach for the computation of the deformation field between three dimensional (3D) images. The deformation field minimizes the sum of the squared differences between the images to be matched and is constrained by the physical properties of the different objects represented by the image. The objects are modeled as elastic bodies. Compared to optical flow methods, this approach distinguishes itself by three main characteristics: it can account for the actual physical properties of the objects to be deformed, it can provide us with physical properties of the deformed objects (i.e. stress tensors), and computes a global solution to the deformation instead of a set of local solutions. This latter characteristic is achieved through a finite-element based scheme. The finite element approach requires the different objects in the images to be meshed. Therefore, a tetrahedral mesh generator using a pre-computed case table and specifically suited for segmented images has been developed. Preliminary experiments on simulated data as well as on medical data have been carried out successfully. Tested medical applications included muscle exercise imaging and ventricular deformation in multiple sclerosis.

Download to read the full chapter text

Chapter PDF

Similar content being viewed by others

Image-to-mesh conversion method for multi-tissue medical image computing simulations

Article Open access 01 August 2024

An information-based machine learning approach to elasticity imaging

Article 18 November 2016

Template-Based 3D Reconstruction of Non-rigid Deformable Object from Monocular Video

Article 25 May 2018

Explore related subjects

Discover the latest articles, books and news in related subjects, suggested using machine learning.
  • Computer Modelling
  • Image Processing
  • Shape Analysis
  • Three-Dimensional Imaging
  • Biomechanical Analysis and Modeling
  • 3-D Image Reconstruction
  • Computational Fluid Dynamics in Real-Time Simulations

References

  1. Delinguette, H.: Toward Realistic Soft-tissue Modeling in Medical Simulation. Proceedings of the IEEE 86(3), 512–523 (1998)

    Article  Google Scholar 

  2. Paulsen, D.D., Miga, M.I., Kennedy, F.E., Hoopes, P.J., Hartov, A., Roberts, D.W.: A Computational Model for Tracking Subsurface Tissue Deformation During Stereotactic Neurosurgery. IEEE Transactions on Biomedical Engineering 46(2), 213–225 (1999)

    Article  Google Scholar 

  3. Skrinjar, O., Spenser, D., Duncan, J.: Brain Shift Modeling for use in Neurosurgery. In: Wells, W.M., Colchester, A.C.F., Delp, S.L. (eds.) MICCAI 1998. LNCS, vol. 1496, pp. 641–649. Springer, Heidelberg (1998)

    Google Scholar 

  4. Gibson, S.F.: 3D Chainmail: a Fast Algorithm for Deforming Volumetric Objects. In: Symposium on Interactive 3D Graphics, ACM SIGGRAPH, pp. 149–154 (1997)

    Google Scholar 

  5. Bro-Nielsen, M.: Modeling Elasticity in Solids using Active Cubes: Application to Simulated Operations. Computer Vision, Virtual Reality and Robotics in Medicine, 535–541 (1995)

    Google Scholar 

  6. Bauchemin, S., Barron, J.L.: The Computation of Optical Flow. ACM computing surveys 27(3) (1995)

    Google Scholar 

  7. Dengler, J., Schmidt, M.: The Dynamic Pyramid - a Model for Motion Analysis with Controlled Continuity. International Journal of Pattern Recognition and Artificial Intelligence 2, 275–288 (1988)

    Article  Google Scholar 

  8. Bajcsy, R., Kovacic, S.: Multi Resolution Elastic Matching. Computer Vision, Graphics and Image Processing 46, 1–21 (1989)

    Article  Google Scholar 

  9. Davatzikos, C.: Spatial Transformation and Registration of Brain Images using Elastically Deformable Models. Computer Vision and Image Understanding 66(2), 207–222 (1997)

    Article  Google Scholar 

  10. Christensen, G.E., Joshi, S.C., Miller, M.I.: Volumetric Transformation of Brain Anatomy. IEEE Transactions on Medical Imaging 16(6), 864–877 (1997)

    Article  Google Scholar 

  11. Bro-Nielsen, M., Gramkow, C.: Fast Fluid Registration of Medical Images. In: Höhne, K.H., Kikinis, R. (eds.) VBC 1996. LNCS, vol. 1131, pp. 267–276. Springer, Heidelberg (1996)

    Google Scholar 

  12. Kyriacou, D.K., Davatzikos, C.: A Biomechanical Model of Soft Tissue Deformation with Applications to Non-rigid Registration of Brain Images with Tumor Pathology. In: Wells, W.M., Colchester, A.C.F., Delp, S.L. (eds.) MICCAI 1998. LNCS, vol. 1496, pp. 531–538. Springer, Heidelberg (1998)

    Google Scholar 

  13. Hagemann, A., Rohr, K., Stiel, H.S., Spetzger, U., Gilsbach, J.M.: Non-Rigid Matching of Tomographic Images Based on a Biomechanical Model of the Human Head. In: SPIE Medical Imaging (1999)

    Google Scholar 

  14. Zienkewickz, O.C., Taylo, R.L.: The Finite Element Method. McGraw Hill Book Co., New York (1987)

    Google Scholar 

  15. Nielson, G.M., Sung, J.: Interval Volume Tetrahedrization. In Visualization 1997, 221–228 (1997)

    Google Scholar 

  16. Balay, S., Gropp, W.D., Curfman McInnes, L., Smith, B.F.: PETSc 2.0 for MPI - Portable, Extensible Toolkit for Scientific Computations (1998), http://www.mcs.anl.gov/petsc

  17. Schroeder, W., Martin, K., Lorensen, B.: The Visualization Toolkit: An Object-Oriented Approach to 3D Graphics. Prentice Hall PTR, New Jersey (1996)

    Google Scholar 

  18. Fleckenstein, J.L., Crues III, J.V., Reimers, C.D.: Muscle Imaging in Health and Disease. Springer, Heidelberg (1996)

    Google Scholar 

  19. Geiger, B.: Three Dimensional Modeling of Human Organs and its application to diagnosis and surgical planning. Report 2105, INRIA Sophia-Antipolis France (1993)

    Google Scholar 

Download references

Author information

Authors and Affiliations

  1. Radiology, Brigham and Womens Hospital, Harvard Medical School, Boston, USA

    Matthieu Ferrant, Simon K. Warfield, Charles R. G. Guttmann, Robert V. Mulkern, Ferenc A. Jolesz & Ron Kikinis

  2. Telecommunications Laboratory, Université catholique de Louvain, Belgium

    Matthieu Ferrant

  3. Radiology, Children’s Hospital, Boston, USA

    Robert V. Mulkern

Authors
  1. Matthieu Ferrant
    View author publications

    Search author on:PubMed Google Scholar

  2. Simon K. Warfield
    View author publications

    Search author on:PubMed Google Scholar

  3. Charles R. G. Guttmann
    View author publications

    Search author on:PubMed Google Scholar

  4. Robert V. Mulkern
    View author publications

    Search author on:PubMed Google Scholar

  5. Ferenc A. Jolesz
    View author publications

    Search author on:PubMed Google Scholar

  6. Ron Kikinis
    View author publications

    Search author on:PubMed Google Scholar

Editor information

Editors and Affiliations

  1. Imaging Sciences, University of Manchester, Manchester, UK

    Chris Taylor

  2. University of Kent, CT2 7NT, Canterbury, Kent, UK

    Alain Colchester

Rights and permissions

Reprints and permissions

Copyright information

© 1999 Springer-Verlag Berlin Heidelberg

About this paper

Cite this paper

Ferrant, M., Warfield, S.K., Guttmann, C.R.G., Mulkern, R.V., Jolesz, F.A., Kikinis, R. (1999). 3D Image Matching Using a Finite Element Based Elastic Deformation Model. In: Taylor, C., Colchester, A. (eds) Medical Image Computing and Computer-Assisted Intervention – MICCAI’99. MICCAI 1999. Lecture Notes in Computer Science, vol 1679. Springer, Berlin, Heidelberg. https://doi.org/10.1007/10704282_22

Download citation

  • .RIS
  • .ENW
  • .BIB
  • DOI: https://doi.org/10.1007/10704282_22

  • Publisher Name: Springer, Berlin, Heidelberg

  • Print ISBN: 978-3-540-66503-8

  • Online ISBN: 978-3-540-48232-1

  • eBook Packages: Springer Book Archive

Share this paper

Anyone you share the following link with will be able to read this content:

Sorry, a shareable link is not currently available for this article.

Provided by the Springer Nature SharedIt content-sharing initiative

Keywords

  • Elastic Body
  • Deformable Model
  • Tetrahedral Mesh
  • Optical Flow Method
  • Computer Assist Surgery

These keywords were added by machine and not by the authors. This process is experimental and the keywords may be updated as the learning algorithm improves.

Publish with us

Policies and ethics

Search

Navigation

  • Find a journal
  • Publish with us
  • Track your research

Footer Navigation

Discover content

  • Journals A-Z
  • Books A-Z

Publish with us

  • Journal finder
  • Publish your research
  • Language editing
  • Open access publishing

Products and services

  • Our products
  • Librarians
  • Societies
  • Partners and advertisers

Our brands

  • Springer
  • Nature Portfolio
  • BMC
  • Palgrave Macmillan
  • Apress
  • Discover

Corporate Navigation

  • Your US state privacy rights
  • Accessibility statement
  • Terms and conditions
  • Privacy policy
  • Help and support
  • Legal notice
  • Cancel contracts here

162.0.217.198

Not affiliated

Springer Nature

© 2026 Springer Nature