Continuous time recurrent neural networks: Overview and benchmarking at forecasting blood glucose in the intensive care unit.

Alejandro Metke-Jimenez Alejandro Metke

Oisin Fitzgerald Óscar Pérez Concha Blanca Gallego Luxan Alejandro Metke-Jimenez Lachlan Rudd Louisa Jorm Continuous time recurrent neural networks: Overview and benchmarking at forecasting blood glucose in the intensive care unit. 104498 2023 October 146 J. Biomed. Informatics https://doi.org/10.1016/j.jbi.2023.104498 db/journals/jbi/jbi146.html#FitzgeraldCLMRJ23

Oisin Fitzgerald Óscar Pérez Concha Blanca Gallego Luxan Alejandro Metke-Jimenez Lachlan Rudd Louisa Jorm Continuous time recurrent neural networks: overview and application to forecasting blood glucose in the intensive care unit. 2023 abs/2304.07025 CoRR https://doi.org/10.48550/arXiv.2304.07025 db/journals/corr/corr2304.html#abs-2304-07025

John Grimes Piotr Szul Alejandro Metke-Jimenez Michael Lawley Kylynn Loi Pathling: analytics on FHIR. 23 2022 13 J. Biomed. Semant. 1 https://doi.org/10.1186/s13326-022-00277-1 https://www.wikidata.org/entity/Q125340904 db/journals/biomedsem/biomedsem13.html#GrimesSMLL22

Duy-Hoa Ngo Madonna Kemp Donna Truran Bevan Koopman Alejandro Metke-Jimenez Semantic Search for Large Scale Clinical Ontologies. 2022 abs/2201.00118 CoRR https://arxiv.org/abs/2201.00118 db/journals/corr/corr2201.html#abs-2201-00118

Oisin Fitzgerald Óscar Pérez Concha Blanca Gallego Manoj K. Saxena Lachlan Rudd Alejandro Metke-Jimenez Louisa Jorm Incorporating real-world evidence into the development of patient blood glucose prediction algorithms for the ICU. 1642-1650 2021 28 J. Am. Medical Informatics Assoc. 8 https://doi.org/10.1093/jamia/ocab060 https://www.wikidata.org/entity/Q112292415 db/journals/jamia/jamia28.html#FitzgeraldCGSRM21

Duy-Hoa Ngo Madonna Kemp Donna L. Truran Bevan Koopman Alejandro Metke-Jimenez Semantic Search for Large Scale Clinical Ontologies. 2021 AMIA https://knowledge.amia.org/74229-amia-1.4622266/t003-1.4626466/t003-1.4626467/3577522-1.4626585/3576930-1.4626582 conf/amia/2021 db/conf/amia/amia2021.html#NgoKTKM21 Alejandro Metke-Jimenez Michael Lawley David P. Hansen FHIR OWL: Transforming OWL ontologies into FHIR terminology resources. 2019 AMIA https://knowledge.amia.org/69862-amia-1.4570936/t004-1.4574923/t004-1.4574924/3202495-1.4575027/3202087-1.4575024 conf/amia/2019 db/conf/amia/amia2019.html#Metke-JimenezLH19

Alejandro Metke-Jimenez Jim Steel David P. Hansen Michael Lawley Ontoserver: a syndicated terminology server. 24:1-24:10 2018 9 J. Biomed. Semant. 1 https://doi.org/10.1186/s13326-018-0191-z https://www.wikidata.org/entity/Q58732527 db/journals/biomedsem/biomedsem9.html#Metke-JimenezSH18

Duy-Hoa Ngo Alejandro Metke-Jimenez Anthony N. Nguyen Knowledge-based Feature Engineering for Detecting Medication and Adverse Drug Events from Electronic Health Records. 31-38 2018 Medication and Adverse Drug Event Detection http://proceedings.mlr.press/v90/ngo18a.html conf/medaded/2018 db/conf/medaded/medaded2018.html#NgoMN18

Hugo Leroux Alejandro Metke-Jimenez Michael John Lawley Towards achieving semantic interoperability of clinical study data with FHIR. 41:1-41:14 2017 8 J. Biomed. Semant. 1 https://doi.org/10.1186/s13326-017-0148-7 https://www.wikidata.org/entity/Q41714476 db/journals/biomedsem/biomedsem8.html#LerouxML17

Alejandro Metke-Jimenez Sarvnaz Karimi Concept Identification and Normalisation for Adverse Drug Event Discovery in Medical Forums. 2016 BMDID@ISWC https://ceur-ws.org/Vol-1709/BMDID_2016_paper_5.pdf conf/semweb/2016bmdid db/conf/semweb/bmdid2016.html#Metke-JimenezK16

Sarvnaz Karimi Chen Wang 0008 Alejandro Metke-Jimenez Raj Gaire 0001 Cécile Paris Text and Data Mining Techniques in Adverse Drug Reaction Detection. 56:1-56:39 2015 47 ACM Comput. Surv. 4 https://doi.org/10.1145/2719920 db/journals/csur/csur47.html#KarimiWMGP15

Sarvnaz Karimi Alejandro Metke-Jimenez Madonna Kemp Chen Wang 0008 Cadec: A corpus of adverse drug event annotations. 73-81 2015 55 J. Biomed. Informatics https://doi.org/10.1016/j.jbi.2015.03.010 https://www.wikidata.org/entity/Q38394176 db/journals/jbi/jbi55.html#KarimiMKW15

Hamed Tayebikhorami Alejandro Metke-Jimenez Anthony N. Nguyen Guido Zuccon Oyster: A Tool for Fine-Grained Ontological Annotations in Free-Text. 440-446 2015 AIRS https://doi.org/10.1007/978-3-319-28940-3_39 conf/airs/2015 db/conf/airs/airs2015.html#TayebikhoramiMN15 Sarvnaz Karimi Alejandro Metke-Jimenez Anthony N. Nguyen CADEminer: A System for Mining Consumer Reports on Adverse Drug Side Effects. 47-50 2015 ESAIR@CIKM https://doi.org/10.1145/2810133.2810143 conf/cikm/2015esair db/conf/cikm/esair2015.html#KarimiMN15 Hugo Leroux Alejandro Metke Michael John Lawley ODM on FHIR: Towards Achieving Semantic Interoperability of Clinical Study Data. 59-68 2015 SWAT4LS https://ceur-ws.org/Vol-1546/paper_18.pdf conf/swat4ls/2015 db/conf/swat4ls/swat4ls2015.html#LerouxML15

Alejandro Metke-Jimenez Sarvnaz Karimi Concept Extraction to Identify Adverse Drug Reactions in Medical Forums: A Comparison of Algorithms. 2015 abs/1504.06936 CoRR http://arxiv.org/abs/1504.06936 db/journals/corr/corr1504.html#Metke-JimenezK15

Alejandro Metke-Jimenez Sarvnaz Karimi Cécile Paris Evaluation of text-processing algorithms for adverse drug event extraction from social media. 15-20 2014 SoMeRA@SIGIR https://doi.org/10.1145/2632188.2632200 conf/sigir/2014somera db/conf/sigir/somera2014.html#Metke-JimenezKP14 Alejandro Metke-Jimenez Michael Lawley Snorocket 2.0: Concrete Domains and Concurrent Classification. 32-38 2013 ORE https://ceur-ws.org/Vol-1015/paper_3.pdf conf/ore/2013 db/conf/ore/ore2013.html#Metke-JimenezL13 Alejandro Metke-Jimenez Kerry Raymond Ian MacColl Ontologies Derived from Wikipedia - A Framework for Comparison. 382-387 2010 KEOD conf/ic3k/2010keod db/conf/ic3k/keod2010.html#Metke-JimenezRM10 Keith Duddy Michael Henderson Alejandro Metke-Jimenez Jim Steel Design of a model-generated repository as a service for USDL. 707-713 2010 iiWAS https://doi.org/10.1145/1967486.1967600 conf/iiwas/2010 db/conf/iiwas/iiwas2010.html#DuddyHMS10 Keith Duddy Oisin Fitzgerald Raj Gaire 0001 Blanca GallegoBlanca Gallego Luxan John Grimes David P. Hansen Michael Henderson Louisa Jorm Sarvnaz Karimi Madonna Kemp Bevan Koopman Michael LawleyMichael John Lawley Hugo Leroux Kylynn Loi Ian MacColl Duy-Hoa Ngo Anthony N. Nguyen Cécile Paris Óscar PérezÓscar Pérez Concha Kerry Raymond Lachlan Rudd Manoj K. Saxena Jim Steel Piotr Szul Hamed Tayebikhorami Donna TruranDonna L. Truran Chen Wang 0008 Guido Zuccon