The rise and potential opportunities of large language model agents in bioinformatics and biomedicine.

Yihang Xiao

Tiantian Yang Yihang Xiao Zhijie Bao Jianye Hao Jiajie Peng The rise and potential opportunities of large language model agents in bioinformatics and biomedicine. 2025 November 26 Briefings Bioinform. 6 https://doi.org/10.1093/bib/bbaf601 db/journals/bib/bib26.html#YangXBHP25 streams/journals/bib

Yihang Xiao Cunzhi Li Zhiwu Zhou Dongyang Hou Xiaoguang Zhou Analysis and Optimization of the Spatial Patterns of Commercial Service Facilities Based on Multisource Spatiotemporal Data and Graph Neural Networks: A Case Study of Beijing, China. 23 2025 14 ISPRS Int. J. Geo Inf. 1 https://doi.org/10.3390/ijgi14010023 db/journals/ijgi/ijgi14.html#XiaoLZHZ25 streams/journals/ijgi

Zhen Yuan Shaoqing Jiao Yihang Xiao Jiajie Peng scMamba: A Scalable Foundation Model for Single-Cell Multi-Omics Integration Beyond Highly Variable Feature Selection. 2025 June abs/2506.20697 CoRR https://doi.org/10.48550/arXiv.2506.20697 db/journals/corr/corr2506.html#abs-2506-20697 streams/journals/corr

Jingru Wang Yihang Xiao Xuequn Shang 0001 Jiajie Peng Predicting drug-target binding affinity with cross-scale graph contrastive learning. 2024 January 25 Briefings Bioinform. 1 https://doi.org/10.1093/bib/bbad516 https://www.wikidata.org/entity/Q130046171 db/journals/bib/bib25.html#WangXSP24 streams/journals/bib

Yihang Xiao Jinyi Liu 0002 Yan Zheng 0002 Xiaohan Xie Jianye Hao Mingzhi Li Ruitao Wang Fei Ni 0001 Yuxiao Li Jintian Luo Shaoqing Jiao Jiajie Peng CellAgent: An LLM-driven Multi-Agent Framework for Automated Single-cell Data Analysis. 2024 abs/2407.09811 CoRR https://doi.org/10.48550/arXiv.2407.09811 db/journals/corr/corr2407.html#abs-2407-09811 streams/journals/corr

Hao Wang Xiao Peng Yihang Xiao Zhengquan Xu Xian Chen Differentially private data aggregating with relative error constraint. 2022 641-656 8 Complex Intell. Syst. 1 https://doi.org/10.1007/s40747-021-00550-3 db/journals/comintsys/comintsys8.html#WangPXXC22 streams/journals/comintsys

Zhijie Bao Xian Chen Jianye Hao Dongyang Hou Shaoqing Jiao Cunzhi Li Mingzhi Li Yuxiao Li Jinyi Liu 0002 Jintian Luo Fei Ni 0001 Jiajie Peng Xiao Peng Xuequn Shang 0001 Hao Wang Jingru Wang Ruitao Wang Xiaohan Xie Zhengquan Xu Tiantian Yang Zhen Yuan Yan Zheng 0002 Xiaoguang Zhou Zhiwu Zhou