Phasik: a Python package to identify system states in partially temporal networks.

Laurent Tichit

Maxime Lucas Alex Townsend-Teague Matteo Neri Simone Poetto Arthur Morris Bianca Habermann Laurent Tichit Phasik: a Python package to identify system states in partially temporal networks. 5872 2023 December 8 J. Open Source Softw. 92 https://doi.org/10.21105/joss.05872 db/journals/jossw/jossw8.html#LucasTNPMHT23

Elva María Novoa-del-Toro Efrén Mezura-Montes Matthieu Vignes Morgane Térézol Frédérique Magdinier Laurent Tichit Anaïs Baudot A multi-objective genetic algorithm to find active modules in multiplex biological networks. 2021 17 PLoS Comput. Biol. 8 https://doi.org/10.1371/journal.pcbi.1009263 https://www.wikidata.org/entity/Q112289702 db/journals/ploscb/ploscb17.html#Novoa-del-ToroM21

Léo Pio-Lopez Alberto Valdeolivas Laurent Tichit Elisabeth Remy Anaïs Baudot MultiVERSE: a multiplex and multiplex-heterogeneous network embedding approach. 2020 abs/2008.10085 CoRR https://arxiv.org/abs/2008.10085 db/journals/corr/corr2008.html#abs-2008-10085

Alberto Valdeolivas Laurent Tichit Claire Navarro Sophie Perrin Gaëlle Odelin Nicolas Levy Pierre Cau Elisabeth Remy Anaïs Baudot Random walk with restart on multiplex and heterogeneous biological networks. 497-505 2019 35 Bioinform. 3 https://doi.org/10.1093/bioinformatics/bty637 https://www.wikidata.org/entity/Q90312540 db/journals/bioinformatics/bioinformatics35.html#ValdeolivasTNPO19

Gilles Didier Laurent Tichit Designing optimal- and fast-on-average pattern matching algorithms. 45-60 2017 42 J. Discrete Algorithms https://doi.org/10.1016/j.jda.2016.11.001 db/journals/jda/jda42.html#DidierT17

Gilles Didier Laurent Tichit Designing optimal- and fast-on-average pattern matching algorithms. 2016 abs/1604.08860 CoRR http://arxiv.org/abs/1604.08860 db/journals/corr/corr1604.html#DidierT16

Lionel Spinelli Philippe Gambette Charles E. Chapple Benoît Robisson Anaïs Baudot Henri Garreta Laurent Tichit Alain Guénoche Christine Brun Clust&See: A Cytoscape plugin for the identification, visualization and manipulation of network clusters. 91-95 2013 113 Biosyst. 2 https://doi.org/10.1016/j.biosystems.2013.05.010 https://www.wikidata.org/entity/Q45007138 db/journals/biosystems/biosystems113.html#SpinelliGCRBGTGB13

Carl Herrmann Sèverine Bérard Laurent Tichit SimCT: a generic tool to visualize ontology-based relationships for biological objects. 3197-3198 2009 25 Bioinform. 23 https://doi.org/10.1093/bioinformatics/btp553 https://www.wikidata.org/entity/Q33506233 db/journals/bioinformatics/bioinformatics25.html#HerrmannBT09

Núria Gala Véronique Rey Laurent Tichit Dispersion sémantique dans des familles morpho-phonologiques : éléments théoriques et empiriques. 120-127 2009 TALN (Articles courts) https://aclanthology.org/2009.jeptalnrecital-court.14/ conf/taln/2009-2 db/conf/taln/taln2009-2.html#GalaRT09

Aïda Ouangraoua Pascal Ferraro Laurent Tichit Serge Dulucq Local similarity between quotiented ordered trees. 23-35 2007 5 J. Discrete Algorithms 1 https://doi.org/10.1016/j.jda.2006.03.010 db/journals/jda/jda5.html#OuangraouaFTD07

Serge Dulucq Laurent Tichit RNA secondary structure comparison: exact analysis of the Zhang-Shasha tree edit algorithm. 471-484 2003 306 Theor. Comput. Sci. 1-3 https://doi.org/10.1016/S0304-3975(03)00323-2 db/journals/tcs/tcs306.html#DulucqT03

Anaïs Baudot Sèverine Bérard Marie-Christine BrunChristine Brun Pierre Cau Charles E. Chapple Gilles Didier Serge Dulucq Pascal Ferraro Núria Gala Philippe Gambette Henri Garreta Alain Guénoche Bianca Habermann Carl Herrmann Nicolas Levy Maxime Lucas Frédérique Magdinier Efrén Mezura-Montes Arthur Morris Claire Navarro Matteo Neri Elva María Novoa-del-Toro Gaëlle Odelin Aïda Ouangraoua Sophie Perrin Léo Pio-Lopez Simone Poetto Elisabeth Remy Véronique Rey Benoît Robisson Lionel Spinelli Morgane Térézol Alex Townsend-Teague Alberto Valdeolivas Matthieu Vignes