Utilizing longitudinal microbiome taxonomic profiles to predict food allergy via Long Short-Term Memory networks.

David L. Perkins

Ahmed A. Metwally Philip S. Yu Derek Reiman Yang Dai Patricia W. Finn David L. Perkins Utilizing longitudinal microbiome taxonomic profiles to predict food allergy via Long Short-Term Memory networks. 2019 15 PLoS Comput. Biol. 2 https://doi.org/10.1371/journal.pcbi.1006693 https://www.wikidata.org/entity/Q61800423 db/journals/ploscb/ploscb15.html#MetwallyYRDFP19

Mladen R. Rasic Ahmed A. Metwally Patricia W. Finn David L. Perkins Taxonomic Classification at the Strain Level using a Species-of-Interest $\boldsymbol{k}$-mer Database. 1-4 2019 BHI https://doi.org/10.1109/BHI.2019.8834593 conf/bhi/2019 db/conf/bhi/bhi2019.html#RasicMFP19 Ahmed A. Metwally Patricia W. Finn Yang Dai David L. Perkins Detection of Differential Abundance Intervals in Longitudinal Metagenomic Data Using Negative Binomial Smoothing Spline ANOVA. 295-304 2017 BCB https://doi.org/10.1145/3107411.3107429 conf/bcb/2017 db/conf/bcb/bcb2017.html#MetwallyFDP17 Ahmed Metwally 0002 Christian Ascoli Kalista Andropolis Ravi Ranjan Yang Dai Thomas Ferkol Patricia W. Finn David L. Perkins Microbiome Dynamics as Predictors of Lung Transplant Rejection. 619 2017 BCB https://doi.org/10.1145/3107411.3108229 conf/bcb/2017 db/conf/bcb/bcb2017.html#MetwallyAARDFFP17

Xin Lu David L. Perkins Re-sampling strategy to improve the estimation of number of null hypotheses in FDR control under strong correlation structures. 2007 8 BMC Bioinform. https://doi.org/10.1186/1471-2105-8-157 https://www.wikidata.org/entity/Q30479567 db/journals/bmcbi/bmcbi8.html#LuP07

Kalista Andropolis Christian Ascoli Yang Dai Thomas Ferkol Patricia W. Finn Xin Lu Ahmed Metwally 0002Ahmed A. Metwally Ravi Ranjan Mladen R. Rasic Derek Reiman Philip S. Yu