ExPheWas: a platform for cis-Mendelian randomization and gene-based association scans.

Marie-Pierre Dubé University of Montreal, Canada https://loop.frontiersin.org/people/34876/ https://zbmath.org/authors/?q=ai:dube.marie-pierre https://twitter.com/mp_dube https://orcid.org/0000-0001-8442-4393 https://www.wikidata.org/entity/Q30002184 https://www.researcherid.com/rid/B-9364-2008 https://www.scopus.com/authid/detail.uri?authorId=7103243627

Marc-André Legault Louis-Philippe Lemieux Perreault Jean-Claude Tardif Marie-Pierre Dubé ExPheWas: a platform for cis-Mendelian randomization and gene-based association scans. 305-311 2022 50 Nucleic Acids Res. W1 https://doi.org/10.1093/nar/gkac289 db/journals/nar/nar50.html#LegaultPTD22

Deepak Sharma Audrey Durand Marc-André Legault Louis-Philippe Lemieux Perreault Audrey Lemaçon Marie-Pierre Dubé Joelle Pineau Deep interpretability for GWAS. 2020 abs/2007.01516 CoRR https://arxiv.org/abs/2007.01516 db/journals/corr/corr2007.html#abs-2007-01516

Adriana Romero Pierre Luc Carrier Akram Erraqabi Tristan Sylvain Alex Auvolat Etienne Dejoie Marc-André Legault Marie-Pierre Dubé Julie G. Hussin Yoshua Bengio Diet Networks: Thin Parameters for Fat Genomics. 2017 ICLR (Poster) https://openreview.net/forum?id=Sk-oDY9ge conf/iclr/2017 db/conf/iclr/iclr2017.html#RomeroCESADLDHB17

Louis-Philippe Lemieux Perreault Marc-André Legault Géraldine Asselin Marie-Pierre Dubé genipe: an automated genome-wide imputation pipeline with automatic reporting and statistical tools. 3661-3663 2016 32 Bioinform. 23 https://doi.org/10.1093/bioinformatics/btw487 https://www.wikidata.org/entity/Q36096758 db/journals/bioinformatics/bioinformatics32.html#PerreaultLAD16

Adriana Romero Pierre Luc Carrier Akram Erraqabi Tristan Sylvain Alex Auvolat Etienne Dejoie Marc-André Legault Marie-Pierre Dubé Julie G. Hussin Yoshua Bengio Diet Networks: Thin Parameters for Fat Genomic. 2016 abs/1611.09340 CoRR http://arxiv.org/abs/1611.09340 db/journals/corr/corr1611.html#RomeroCESADLDHB16

Louis-Philippe Lemieux Perreault Marc-André Legault Amina Barhdadi Sylvie Provost Valérie Normand Jean-Claude Tardif Marie-Pierre Dubé Comparison of genotype clustering tools with rare variants. 52 2014 15 BMC Bioinform. https://doi.org/10.1186/1471-2105-15-52 https://www.wikidata.org/entity/Q35100135 db/journals/bmcbi/bmcbi15.html#PerreaultLBPNTD14

Louis-Philippe Lemieux Perreault Sylvie Provost Marc-André Legault Amina Barhdadi Marie-Pierre Dubé pyGenClean: efficient tool for genetic data clean up before association testing. 1704-1705 2013 29 Bioinform. 13 https://doi.org/10.1093/bioinformatics/btt261 https://www.wikidata.org/entity/Q30622164 db/journals/bioinformatics/bioinformatics29.html#PerreaultPLBD13

Louis-Philippe Lemieux Perreault Gregor U. Andelfinger Géraldine Asselin Marie-Pierre Dubé Partitioning of copy-number genotypes in pedigrees. 226 2010 11 BMC Bioinform. https://doi.org/10.1186/1471-2105-11-226 https://www.wikidata.org/entity/Q33571025 db/journals/bmcbi/bmcbi11.html#PerreaultAAD10

Nelli Shimko Marie-Pierre Dubé Gene-Gene Interaction Tests Using SVM and Neural Network Modeling. 90-97 2007 CIBCB https://doi.org/10.1109/CIBCB.2007.4221209 conf/cibcb/2007 db/conf/cibcb/cibcb2007.html#ShimkoD07 Nelli Shimko Marie-Pierre Dubé Bootstrap Inference with Neural-Network Modeling for Gene-Disease Association Testing. 1-7 2006 CIBCB https://doi.org/10.1109/CIBCB.2006.330950 https://www.wikidata.org/entity/Q57239703 conf/cibcb/2006 db/conf/cibcb/cibcb2006.html#ShimkoD06 Gregor U. Andelfinger Géraldine Asselin Alex Auvolat Amina Barhdadi Yoshua Bengio Pierre Luc Carrier Etienne Dejoie Audrey Durand Akram Erraqabi Julie G. Hussin Marc-André Legault Audrey Lemaçon Valérie Normand Louis-Philippe Lemieux Perreault Joelle Pineau Sylvie Provost Adriana Romero Deepak Sharma Nelli Shimko Tristan Sylvain Jean-Claude Tardif