Tommi Mäklin themaklin
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maklin.fi
Shell 0 0
Sources for my personal webpage https://maklin.fi Created using hugo.
Updated 2026-03-26 17:21:03 +01:00
ahda
Rust 0 0
Compression, format conversion, and set operations for pseudoalignment data
Updated 2026-03-25 13:12:30 +01:00
panaani
Rust 0 0
Pangenome-aware dereplication of bacterial genomes into ANI clusters.
Updated 2026-01-06 13:44:56 +01:00
ntcomp
Rust 0 1
Sequencing data compression using SBWT and k-bounded matching statistics.
bioinformatics compression decompression genomics rust sbwt sequencing-data
Updated 2026-01-06 13:43:53 +01:00
puoluekone
R 0 0
An interactive R-shiny app for determining optimal political party composition based on fitness between answers given by a user and members of the parties. Estimated using the bacterial strain identification method, mSWEEP https://doi.org/10.1101/33.
Updated 2026-01-06 11:53:40 +01:00
booktex
TeX 0 0
LaTeX template for a book containing several articles from different authors, possibly in different languages, with their own different bibliographies.
Updated 2026-01-06 11:52:44 +01:00
vaikkari
TeX 0 0
LaTeX source code for my doctoral dissertation "Probabilistic Methods for High-Resolution Metagenomics". Available from the digital repository of the University of Helsinki at https://helda.helsinki.fi/handle/10138/349862.
creative-commons doctoral-dissertation latex-document metagenomics probabilistic-modeling university-of-helsinki
Updated 2026-01-06 11:50:27 +01:00
vaaligp
R 0 0
Gaussian process poll aggregator for 2023 Finnish parlamentary election polling using Stan.
Updated 2026-01-06 11:46:04 +01:00
agc-istream
C++ 0 0
(wip) Read samples from agc archives using C++ iostreams.
Updated 2026-01-06 11:43:05 +01:00
cpprate
C++ 0 0
Reimplementation of the variable selection via RATE method https://github.com/lorinanthony/RATE
Updated 2026-01-06 11:36:57 +01:00
kbo-gui
Rust 0 0
Graphical web user interface for the kbo local aligner built with Dioxus
bioinformatics dioxus genomics kbo rust sbwt sequence-aligner wasm webassembly
Updated 2026-01-06 11:29:28 +01:00
kbo-cli
Rust 0 0
Command-line interface for the kbo local aligner.
bioinformatics genomics kbo rust sbwt sequence-alignment
Updated 2026-01-06 11:28:00 +01:00
kbo
Rust 0 0
Local alignment search with k-bounded matching statistics.
bioinformatics genomics kbo rust sbwt sequence-alignment
Updated 2026-01-06 11:26:14 +01:00
bxzstr
C++ 0 0
Mirror of https://github.com/tmaklin/bxzstr
bzip2 c-plus-plus compression decompression header-only lzma wrapper zlib zstandard zstd
Updated 2026-01-06 11:21:18 +01:00
mSWEEP2
C++ 0 0
mSWEEP2: Higher-resolution metagenomics
Updated 2026-01-06 11:17:32 +01:00