Package index • move

All functions

DBBMM DBBMM-class: The DBBMM class

DBBMMBurstStack DBBMMBurstStack-class: The DBBMMBurstStack class

DBBMMStack DBBMMStack-class: The DBBMMStack class

Move-class .MoveTrack-class .MoveGeneral-class .MoveTrackSingle-class .MoveTrack .MoveTrackSingle: The Move class

MoveBurst-class .MoveTrackSingleBurst-class: MoveBurst class

MoveStack MoveStack-class [,MoveStack,ANY,ANY-class .MoveTrackStack-class: The MoveStack class

MovebankLogin MovebankLogin-class: The MovebankLogin class

.UD .UD-class .UDStack-class UDStack-class .UDBurstStack-class: The UD class

UDStack(): Creating UDStack objects

angle(<.MoveTrackSingle>) angle(<.MoveTrackStack>): Headings of the segments of a movement track

as.data.frame(<Move>) as.data.frame(<MoveStack>) as.data.frame(<MoveBurst>) as.data.frame(<dBMvariance>) as.data.frame(<.unUsedRecords>) as.data.frame(<.unUsedRecordsStack>): Returns a Data Frame

brownian.bridge.dyn(): Calculates a dynamic Brownian Bridge

brownian.motion.variance.dyn(<.MoveTrackSingle>,<numeric>,<numeric>,<numeric>): Calculates the dynamic brownian motion variance

burst(<Move>,<factor>): Bursting a track

burstId(<MoveBurst>) `burstId<-`(<.MoveTrackSingleBurst>,<factor>): Returns or sets the burstId

citations(<.MoveGeneral>) `citations<-`(<.MoveGeneral>): Extract the citation of a Move or MoveStack object

contour(<.UD>) contour(<.UDStack>): Contour plot

coordinates(<Move>): Extract the track coordinates from a Move or MoveStack object

corridor(<.MoveTrackSingle>) corridor(<.MoveTrackStack>): Corridor behavior identification

dBGBvariance-class dBGBvarianceTmp-class: The dynBGBvariance class

dBMvariance-class dBMvarianceStack-class dBMvarianceBurst-class dBMvarianceTmp-class: The dBMvariance class

distance(<.MoveTrackSingle>,<missing>) distance(<.MoveTrackStack>,<missing>): Distance between the locations of a movement track

duplicatedDataExample: Tracking data example with duplicated timestamps

dynBGB-class: The dynBGB class

dynBGB(<dBGBvariance>,<RasterLayer>,<numeric>) dynBGB(<.MoveTrackSingle>,<RasterLayer>,<numeric>) dynBGB(<.MoveTrackSingle>,<numeric>,<ANY>) dynBGB(<.MoveTrackSingle>,<missing>,<ANY>): Calculation of the dynamic Bivariate Gausian Bridge

dynBGBvariance(): Calculates the Bivariate Gaussian Bridge motion variance

emd(<SpatialPoints>,<SpatialPoints>) emd(<RasterLayer>,<RasterLayer>): Earth movers distance

equalProj(<list>): Checks projections for being equal

fishers: A MoveStack

getDataRepositoryData(): Download data from the Movebank Data Repository

getDuplicatedTimestamps(<character>) getDuplicatedTimestamps(<factor>): Identifies duplicated timestamps

getMotionVariance(): Extracts the estimated motion variance

getMovebank(<character>,<MovebankLogin>): Download Data from Movebank

getMovebankAnimals(): Animals, tags and IDs in a Movebank study

getMovebankData(<numeric>,<character>,<MovebankLogin>) getMovebankData(<numeric>,<numeric>,<MovebankLogin>): Download data from Movebank as a Move object

getMovebankID(): Movebank Study ID

getMovebankLocationData(<numeric>,<numeric>,<character>,<MovebankLogin>) getMovebankLocationData(<numeric>,<numeric>,<numeric>,<MovebankLogin>): Download location data from Movebank as a table

getMovebankNonLocationData(<numeric>,<numeric>,<character>,<MovebankLogin>) getMovebankNonLocationData(<numeric>,<numeric>,<numeric>,<MovebankLogin>): Download non-location data from Movebank

getMovebankReferenceTable(): Download all reference data of a Movebank study

getMovebankSensorsAttributes(): Available attributes of Movebank sensors

getMovebankSensors(): Information about Movebank sensors

getMovebankStudies(): All studies on Movebank

getMovebankStudy(): Returns information of a Movebank study

getVolumeUD(<.UD>): Utilization distribution (UD)

hrBootstrap(<SpatialPoints>) hrBootstrap(<.MoveTrackStack>): Calculates and plots the area of the Minimum Convex Polygon of a track

idData(<.MoveTrack>) `idData<-`(<.MoveTrack>,<missing>,<missing>,<data.frame>) `idData<-`(<.MoveTrack>,<ANY>,<ANY>,<ANY>): Obtain or replace the idData slot of a Move object

interpolateTime(): Interpolate a trajectory

leroy: GPS track data from a fisher

leroydbgb: dynamic Bivariate Gausian Bridge example object

licenseTerms(<.MoveGeneral>) `licenseTerms<-`(<.MoveGeneral>): Extract the license terms of a Move or MoveStack object

lines(<.MoveTrackSingle>) lines(<.MoveTrackStack>) lines(<.MoveTrackSingleBurst>): Plotting the lines of a track

move-package: An overview of the functions in this package

move(<connection>,<missing>,<missing>,<missing>,<missing>) move(<ltraj>,<missing>,<missing>,<missing>,<missing>) move(<telemetry>,<missing>,<missing>,<missing>,<missing>) move(<track_xyt>,<missing>,<missing>,<missing>,<missing>) move(<list>,<missing>,<missing>,<missing>,<missing>) move(<track>,<missing>,<missing>,<missing>,<missing>) move(<binClstPath>,<missing>,<missing>,<missing>,<missing>) move(<binClstStck>,<missing>,<missing>,<missing>,<missing>) move(<data.frame>,<missing>,<missing>,<missing>,<missing>) move(<numeric>,<numeric>,<POSIXct>,<data.frame>,<CRS>): Create a Move object

move2ade(<.MoveTrackSingle>) move2ade(<.MoveTrackStack>): Convert a Move or MoveStack object to a SpatialPointsDataFrame

moveStack(<list>) moveStack(<Move>) moveStack(<MoveStack>): Creating a MoveStack

movebankLogin(<character>,<character>): Login into Movebank

n.indiv(<Move>) n.indiv(<.MoveTrackStack>): Extract the number of individuals of a MoveStack

n.locs(<SpatialPointsDataFrame>) n.locs(<.MoveTrackStack>): Extract the number of locations of a Move or MoveStack object

namesIndiv(): Extract the names of the individuals of a move or moveStack object

outerProbability(<RasterLayer>) outerProbability(<DBBMMStack>): Calculates the probabilities at the edges of a raster

plot(<.MoveTrackSingle>,<missing>) plot(<.MoveTrackStack>,<missing>) plot(<.MoveTrackSingleBurst>,<missing>): Plotting track or raster

plotBursts(<list>) plotBursts(<.MoveTrackSingleBurst>): Plotting the centroids of a bursted track

points(<.MoveTrackSingle>) points(<.MoveTrackStack>) points(<.MoveTrackSingleBurst>): Plotting the points of a track

raster(<DBBMM>) raster(<DBBMMStack>): Extract raster topology from DBBMM or dynBGB

raster2contour(<.UD>) raster2contour(<.UDStack>): Convert raster to contour lines

searchMovebankStudies(): Search for a study on Movebank

seglength(<SpatialPointsDataFrame>): Segment lengths of a track

sensor(<.MoveTrack>) sensor(<.unUsedRecords>): Extract the sensor of a Move unUsedRecords object

show(<Move>): Show a Move, DBBMM, dynBGB object

spTransform(<Move>,<character>) spTransform(<Move>,<missing>): Transform projection of movement track

speed(<.MoveTrackSingle>) speed(<.MoveTrackStack>): Speed between the locations of a movement track

split(<MoveStack>,<missing>): Splitting a MoveStack, MoveBurst or DBBMMStack

`[`(<MoveStack>,<ANY>,<ANY>) `[[`(<MoveStack>,<character>,<missing>): Subset movement tracks

summary(<.UD>) summary(<.UDStack>): Summary of Move, DBBMM, dynBGB objects

thinTrackTime() thinDistanceAlongTrack(): Thinning trajectories to a specific time interval or distance.

timeLag(<.MoveTrackSingle>) timeLag(<.MoveTrackStack>): Time lags between the locations of a movement track

timestamps(<.MoveTrackSingle>) timestamps(<.MoveTrack>) `timestamps<-`(<.MoveTrack>): Extract or set the timestamps of a Move or MoveStack object

trackId(<MoveStack>): Returns trackId

turnAngleGc(<.MoveTrackSingle>): Turning angles on great circle tracks

leroydbbmm: Dynamic brownian bridges

.unUsedRecords-class .unUsedRecordsStack-class: The .unUsedRecords and .unUsedRecordsStack class

unUsedRecords(<.unUsedRecords>) unUsedRecords(<.unUsedRecordsStack>) `unUsedRecords<-`(<.MoveTrackSingle>,<logical>) `unUsedRecords<-`(<.MoveTrackStack>,<logical>): Extracts or creates the unUsedRecords