{"status":"ok","message-type":"work","message-version":"1.0.0","message":{"indexed":{"date-parts":[[2026,2,9]],"date-time":"2026-02-09T22:07:33Z","timestamp":1770674853735,"version":"3.49.0"},"reference-count":32,"publisher":"SAGE Publications","issue":"3","license":[{"start":{"date-parts":[[2017,3,1]],"date-time":"2017-03-01T00:00:00Z","timestamp":1488326400000},"content-version":"tdm","delay-in-days":0,"URL":"http:\/\/www.liebertpub.com\/nv\/resources-tools\/text-and-data-mining-policy\/121\/"}],"content-domain":{"domain":[],"crossmark-restriction":false},"short-container-title":["Journal of Computational Biology"],"published-print":{"date-parts":[[2017,3]]},"DOI":"10.1089\/cmb.2016.0096","type":"journal-article","created":{"date-parts":[[2016,9,23]],"date-time":"2016-09-23T16:58:25Z","timestamp":1474649905000},"page":"200-212","source":"Crossref","is-referenced-by-count":2,"title":["An Enumerative Combinatorics Model for Fragmentation Patterns in RNA Sequencing Provides Insights into Nonuniformity of the Expected Fragment Starting-Point and Coverage Profile"],"prefix":"10.1177","volume":"24","author":[{"given":"Celine","family":"Prakash","sequence":"first","affiliation":[{"name":"Max F. Perutz Laboratories (MFPL), Center for Integrative Bioinformatics Vienna (CIBIV), University of Vienna, Medical University of Vienna, Vienna, Austria."}]},{"given":"Arndt Von","family":"Haeseler","sequence":"additional","affiliation":[{"name":"Max F. Perutz Laboratories (MFPL), Center for Integrative Bioinformatics Vienna (CIBIV), University of Vienna, Medical University of Vienna, Vienna, Austria."},{"name":"Bioinformatics and Computational Biology, Faculty of Computer Science, University of Vienna, Vienna, Austria."}]}],"member":"179","reference":[{"key":"B1","doi-asserted-by":"publisher","DOI":"10.1186\/1465-6906-12-S1-P1"},{"key":"B2","doi-asserted-by":"publisher","DOI":"10.1161\/hh2301.100981"},{"key":"B3","doi-asserted-by":"publisher","DOI":"10.1093\/nar\/gks001"},{"key":"B4","volume-title":"Current Protocols in Human Genetics","author":"Bronner I.F.","year":"2001"},{"key":"B5","doi-asserted-by":"crossref","first-page":"271","DOI":"10.1089\/nat.2012.0367","volume":"22","author":"Chu Y.","year":"2012","journal-title":"Nucleic Acid Therap"},{"key":"B6","doi-asserted-by":"publisher","DOI":"10.1093\/bioinformatics\/bts196"},{"key":"B7","doi-asserted-by":"publisher","DOI":"10.1038\/nature11233"},{"key":"B8","doi-asserted-by":"publisher","DOI":"10.2144\/000114133"},{"key":"B9","doi-asserted-by":"publisher","DOI":"10.1093\/bioinformatics\/bts451"},{"key":"B10","doi-asserted-by":"publisher","DOI":"10.1093\/bioinformatics\/btp113"},{"key":"B11","doi-asserted-by":"publisher","DOI":"10.1038\/nmeth.1491"},{"key":"B12","doi-asserted-by":"publisher","DOI":"10.1093\/bioinformatics\/btp692"},{"key":"B13","first-page":"251364","volume":"2012","author":"Liu L.","year":"2012","journal-title":"Biotechnol"},{"key":"B14","doi-asserted-by":"publisher","DOI":"10.1186\/1471-2105-14-220"},{"key":"B15","doi-asserted-by":"publisher","DOI":"10.1371\/journal.pone.0016327"},{"key":"B16","doi-asserted-by":"publisher","DOI":"10.1038\/nmeth.1226"},{"key":"B17","doi-asserted-by":"publisher","DOI":"10.1016\/j.celrep.2015.12.050"},{"key":"B18","doi-asserted-by":"crossref","first-page":"1851","DOI":"10.1093\/clinchem\/46.11.1851","volume":"46","author":"Panaro N.J.","year":"2000","journal-title":"Clin.Chem"},{"key":"B19","doi-asserted-by":"publisher","DOI":"10.4161\/rna.27361"},{"key":"B20","doi-asserted-by":"publisher","DOI":"10.1093\/nar\/gks1172"},{"key":"B21","doi-asserted-by":"publisher","DOI":"10.1093\/nar\/gku555"},{"key":"B22","doi-asserted-by":"publisher","DOI":"10.1089\/cmb.2012.0022"},{"key":"B23","doi-asserted-by":"publisher","DOI":"10.1093\/bioinformatics\/btt468"},{"key":"B24","first-page":"3340","author":"Sengupta S.","year":"2011","journal-title":"J. Vis. Exp."},{"key":"B25","doi-asserted-by":"publisher","DOI":"10.1038\/nbt.2957"},{"key":"B26","doi-asserted-by":"publisher","DOI":"10.1063\/1.457396"},{"key":"B27","doi-asserted-by":"publisher","DOI":"10.1093\/bioinformatics\/bts356"},{"key":"B28","doi-asserted-by":"publisher","DOI":"10.1038\/nrg2484"},{"key":"B29","doi-asserted-by":"publisher","DOI":"10.1089\/cmb.2006.13.1177"},{"key":"B30","doi-asserted-by":"publisher","DOI":"10.1016\/j.ymeth.2009.03.016"},{"key":"B31","doi-asserted-by":"publisher","DOI":"10.1093\/bioinformatics\/btq696"},{"key":"B32","doi-asserted-by":"publisher","DOI":"10.18637\/jss.v014.i06"}],"container-title":["Journal of Computational Biology"],"original-title":[],"language":"en","link":[{"URL":"http:\/\/www.liebertpub.com\/doi\/full-xml\/10.1089\/cmb.2016.0096","content-type":"application\/xml","content-version":"vor","intended-application":"text-mining"},{"URL":"http:\/\/www.liebertpub.com\/doi\/pdf\/10.1089\/cmb.2016.0096","content-type":"unspecified","content-version":"vor","intended-application":"similarity-checking"}],"deposited":{"date-parts":[[2026,2,9]],"date-time":"2026-02-09T05:44:29Z","timestamp":1770615869000},"score":1,"resource":{"primary":{"URL":"https:\/\/journals.sagepub.com\/doi\/full\/10.1089\/cmb.2016.0096"}},"subtitle":[],"short-title":[],"issued":{"date-parts":[[2017,3]]},"references-count":32,"journal-issue":{"issue":"3","published-print":{"date-parts":[[2017,3]]}},"alternative-id":["10.1089\/cmb.2016.0096"],"URL":"https:\/\/doi.org\/10.1089\/cmb.2016.0096","relation":{},"ISSN":["1557-8666"],"issn-type":[{"value":"1557-8666","type":"electronic"}],"subject":[],"published":{"date-parts":[[2017,3]]}}}